PhD Thesis: Table of Contents

Below you can find a complete table of contents for all thesis-related posts (you can also get to the posts via the “thesis” tag I have used for each). Enjoy!

Thesis Posts

• Abstract
• Additional Front Material
• Chapter 1: Background
  • 1.1: Overview
  • 1.2: What does systems biology data look like?
  • 1.3: Modelling biological systems
  • 1.4: Standards as a shared structure for data
  • 1.5: What are ontologies?
  • 1.6: Data integration methodologies for systems biology
• Chapter 2: SyMBA: a Web-based metadata and data archive for biological experiments
• Chapter 3: Saint: a Web application for model annotation utilising syntactic integration
• Chapter 4: Model Format OWL integrates multiple SBML specification documents
• Chapter 5: Rule-based mediation for the semantic integration of systems biology data
• Chapter 6: General discussion

And, if you’re interested in how I performed the conversion, I’ve written about that too.